Typing and distribution of <i>Plum pox virus</i> isolates in Romania
Abstract
Plum pox or Sharka, caused by Plum pox virus (PPV) is considered the most destructive disease of plum. Although PPV is widespread in all plum growing areas of Romania and causes serious yield losses, little is known about the variability of its isolates at a country level. For this reason, a large-scale study was performed with the aim of obtaining a picture of the prevalence and distribution of PPV strains in plum. During a three year survey, 200 PPV isolates collected from 23 different plum orchards from Transylvania, Moldavia and Muntenia areas were investigated. DASELISA and IC-RT-PCR were used for PPV detection. PPV strains were serologically determined by TAS-ELISA using PPV-D and PPV-M specific monoclonal antibodies. Molecular strain typing was done by IC/RT-PCR targeting three genomic regions corresponding to (Cter)CP, (Cter)NIb/(Nter)CP and CI. RFLP analysis was used to distinguish D and M strains, based on the RsaI polymorphism located in (Cter)CP. To confirm the presence of PPV-Rec strain, 13 PCR products spanning the (Cter)NIb/(Nter)CP were sequenced. Overall results showed that in Romania the predominant strain is PPV-D (73%), followed, with a much lower frequency, by PPV-Rec (14%). Mixed infections (PPV-D+PPVRec), which might generate additional variation by recombination, are also frequent (13%).Keywords: Romania, PPV strains, DAS/TAS-ELISA, IC/RT-PCR, RFLP, sequencing
Downloads
Published
2010-09-30
Issue
Section
Artikel
License
This work is licensed under a Creative Commons Attributed 4.0 International License.
You are free to:
- Share — copy and redistribute the material in any medium or format
- Adapt — remix, transform, and build upon the material for any purpose, even commercially
Under the following terms:
-
Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use
- No additional restrictions — You may not apply legal terms or technological measures that legally restrict others from doing anything the license permits