Genetic inter-relationships among Chinese wild grapes based on SRAP marker analyses

  • Xutong Zhang State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling Shaanxi, P.R. China
  • Peijie Gong State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling Shaanxi, P.R. China
  • Yuanyuan Shi State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling Shaanxi, P.R. China
  • Yuejin Wang State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling Shaanxi, P.R. China
  • Chaohong Zhang State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling Shaanxi, P.R. China
Keywords: Vitis; species; genotypes; polymorphism; genetic diversity.

Abstract

Sequence-Related Amplified Polymorphism (SRAP) markers were used to assess genetic inter-relationships among 39 grape genotypes. These included 22 indigenous Chinese grape species/varieties, the north American V. riparia and the European V. vinifera L. 'Thompson seedless' and 'Pinot noir'. Of the 72 SRAP primer combinations tested, 25 primers generated 135 reliable bands, with an average of 5.52 bands per primer pair. Further analysis shows that 106 of 135 bands were generated by 25 polymorphic primer pairs, with a polymorphism efficiency of 79 %. The similarity coefficients of SRAP polymorphism varied from 0.463 to 0.981 among the genotypes analysed. A dendrogram analysis divided the 39 Vitis accessions into 21 groups with similarity coefficients of 0.83. It reveals broadly similar genetic relationships among the genotypes examined to those previously determined using classical taxonomic methods. Our results define V. heyneana subsp. ficifolia and V. baihensis as subspecies of V. heyneana and V. bashanica, respectively. We question the placement of V. davidii var. cyanocarpa and V. davidii var. ningqiangensis as varieties in V. davidii.

Published
2018-10-10
Section
Article